Representative — Earthworms
Representative — EarthwormsSoil fauna & DNA preservation

Representative images of the group — not photographs of this individual specimen.

EarthwormsOn request Demonstration data

Pontoscolex corethrurus

Tropical earthworm

Record ID: OMN-ANI-0060

Family
Rhinodrilidae
Genus
Pontoscolex
Specimen ID
OLG-0060
Maturity
Juvenile
Soil type
Irrigated garden soil
Habitat
Limestone mountain slopes
Preservation
Ethanol + DNA at −80 °C
Holding institution
National Heritage Collection (Demo)

Overview

Scientific identity

All values on this page are synthetic demonstration data, generated for this prototype.

Taxonomy

AnimaliaAnnelidaClitellataCrassiclitellataRhinodrilidaePontoscolexPontoscolex corethrurus
Subcollection
Earthworms
Samples held
2
Storage
Ethanol store + −80 °C freezer · RT / −80 °C
Molecular status
Characterized (demo)

Genetic resource network

Earthworms

OMN-ANI-0060

Each node jumps to its section on this page.

Morphology

External morphology

Select a structure to read its description. Measurements are synthetic demonstration values.

Schematic illustration (not to scale) · anterior on the left · clitellum highlighted

Selected structure

Prostomium

Lobe above the mouth; its shape (epilobic/tanylobic) aids identification.

Body length

60 mm

Segments

100

Clitellum position

Segments 30–36

Pigmentation

Pale grey

Setae arrangement

Lumbricine (8 per segment)

Biological samples

Sample inventory

The ethanol-preserved specimen and the DNA extract taken from its tail tissue.

Available

Whole specimen in ethanol

SPC-W-0060-E

Preservation
Ethanol 80%
Temperature
Room temperature
Quantity
6 specimens
Prepared
2015-04-07

Shelf W2 · Jar 50

Available

DNA extract (tail tissue)

DNA-W-0060

Preservation
Frozen
Temperature
−80 °C
Quantity
32 µL
Prepared
2015-04-21

Freezer F3 · Rack C1 · Box 16

Sample identifiers, quantities and storage positions are synthetic demonstration values.

Preservation

Storage & sample lifecycle

Where this resource is kept, how its storage conditions are monitored, and each step from collection to storage.

Ethanol store + −80 °C freezer

RT / −80 °C

Whole specimen in ethanol; DNA extract frozen

Freezer F3 · Rack C1 · Box 16

Monitoring · Freezer temperature (°C) · demo log

Dashed line: target temperature.

Sample lifecycle

2015-03-18

Soil sampling

Hand-sorted from soil at Khasab.

Genetics

Molecular data

Markers and sequences linked to this resource. All sequences and genotypes are synthetic demonstration output, not real results.

Markers

Characterized (demo)
Marker
Cytochrome c oxidase I (DNA barcode)
Type
Mitochondrial barcode
Length
658 bp

Sequence viewer · COI

1GCCAACTGGTACAGACCCGCTTACCGGGAGGGCACTCCGCAATGGATATAAACTTGGCGT
61TGTGATTTCGAAGAACGATTCGTGGGAGCAGGCGATCAGAGAGGGTATGTCAGAGAACAG
121TTCTGAGCCTCTGTAACTGTGACGTGCATGCTACGATCCTATTGCTTTAGACCAAGATCC
181TGGTACCTTAATGACAGCCCGTGCTTCAAACAGCGGACAGGCAATTCTGGAAGGATGTGC
241GGATAGAACAATTTCTCACGGCGTGGAGCCTCCACAGACGTGCTTCGGGAATTGTTCCAC
301CAACAGAACTCGCGACTATCCGGAACACGTGCGCAATGTGCACTGTACAAGTGCAAAATG
361TGGTGAGTTAGCTCTTATAGCGAATGTCGCCCCCCTTTCTTACGATCCTAACGCCTGAGT
421AGCTTGACTTTTCTAGAATGGTATAATCCTATCGCTAACGTACACGCCAAATAATCTTGT
481CACCTATAGCAGCAGCACTTCAACATCCCGCCCTGGGGGTCTTCTGTGCCACGACATAAG
541CAGTACTATGTAAGAGCAACCTCACCGTACGTAATTGACGCATTATAGTAACGCTGGACT
601TACTAAGGAAGGGTCTTGCAGACGTGTAGAGCGTCGCACGTGGAGCCTCCGACATGTA

GIS

Geographic origin

Collection site of this record, with other documented records of the same species.

Loading map of Oman…
Khasab, Musandam · Limestone mountain slopes · 14 records of this speciesOpen geographic explorer

Research

Research & publications

Projects and literature linked to this resource.

Data provenance

  1. Original observation

    Collected by M. Al-Balushi, 2015-03-18

  2. Curated record

    National Heritage Collection (Demo)

  3. Generated research data

    Molecular characterization (demo)

No publications linked

Publications citing this record will appear here once they are added by the holding institution.

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