Representative — Earthworms
Representative — EarthwormsSoil fauna & DNA preservation

Representative images of the group — not photographs of this individual specimen.

EarthwormsAvailable Demonstration data

Pontoscolex corethrurus

Tropical earthworm

Record ID: OMN-ANI-0072

Family
Rhinodrilidae
Genus
Pontoscolex
Specimen ID
OLG-0072
Maturity
Clitellate adult
Soil type
Irrigated garden soil
Habitat
Mangrove margin, urban park
Preservation
Ethanol + DNA at −80 °C
Holding institution
National Heritage Collection (Demo)

Overview

Scientific identity

All values on this page are synthetic demonstration data, generated for this prototype.

Taxonomy

AnimaliaAnnelidaClitellataCrassiclitellataRhinodrilidaePontoscolexPontoscolex corethrurus
Subcollection
Earthworms
Samples held
2
Storage
Ethanol store + −80 °C freezer · RT / −80 °C
Molecular status
Characterized (demo)

Genetic resource network

Earthworms

OMN-ANI-0072

Each node jumps to its section on this page.

Morphology

External morphology

Select a structure to read its description. Measurements are synthetic demonstration values.

Schematic illustration (not to scale) · anterior on the left · clitellum highlighted

Selected structure

Prostomium

Lobe above the mouth; its shape (epilobic/tanylobic) aids identification.

Body length

60 mm

Segments

104

Clitellum position

Segments 29–35

Pigmentation

Pale grey

Setae arrangement

Perichaetine (ring)

Biological samples

Sample inventory

The ethanol-preserved specimen and the DNA extract taken from its tail tissue.

Available

Whole specimen in ethanol

SPC-W-0072-E

Preservation
Ethanol 80%
Temperature
Room temperature
Quantity
7 specimens
Prepared
2019-04-30

Shelf W1 · Jar 53

Available

DNA extract (tail tissue)

DNA-W-0072

Preservation
Frozen
Temperature
−80 °C
Quantity
77 µL
Prepared
2019-06-16

Freezer F3 · Rack D3 · Box 8

Sample identifiers, quantities and storage positions are synthetic demonstration values.

Preservation

Storage & sample lifecycle

Where this resource is kept, how its storage conditions are monitored, and each step from collection to storage.

Ethanol store + −80 °C freezer

RT / −80 °C

Whole specimen in ethanol; DNA extract frozen

Freezer F3 · Rack D3 · Box 8

Monitoring · Freezer temperature (°C) · demo log

Dashed line: target temperature.

Sample lifecycle

2019-04-26

Soil sampling

Hand-sorted from soil at Qurum.

Genetics

Molecular data

Markers and sequences linked to this resource. All sequences and genotypes are synthetic demonstration output, not real results.

Markers

Characterized (demo)
Marker
Cytochrome c oxidase I (DNA barcode)
Type
Mitochondrial barcode
Length
658 bp

Sequence viewer · COI

1GCTGGAGCTCTACATGAGAATACGAGGTAGAGAAACCACCGCAGGAATCCGCCACCATCT
61AGGAACATGATAAGCTACAAATAGTATGTTTTGCTCTAAGGCAGAGCGAGAGCCCAGACT
121GCAGCGCTCTTAACGACCATCCGATTCTTTAAATGAGTAAAAACGACATCCCGTATTGAA
181CCGCTATTTCTCATAAATAGGTATGTACTACTCAAGAGGAACCAAAGACACGGGACGAAT
241CTATTTTCGCCCGTAGACACCTACTTATTGATATCAGTTAGATACGAAGCCTCAGATTAA
301ATTCCATATACTGTGATCCTGGTTTGTAGGAAGTCTGCTTGGCGTCGATCCAAATCCCAA
361CCTGAGTAGTCCAATTAAAGGCGAGTTTCATGGGGGAGCCATCCTCGATTAGCAGGGAGA
421GGCACTAATTATGTGTGTGCAGCGGGCTACCGATACCTCTTAGGTACCAGCGAGCTGTAG
481CATGTATCCTCATAAAACGCTTTGTATATCTCAGTTCCAGGGTTGGCTGCGACCCGCCTC
541CGGCAACTGAAGGACAAGAGTACTCCGGCTATGTGTCTGTAAGCCTTCAGTTGCTGCTCT
601GACGGAGCCTTTGACCGAACCCTGTCCGTGGGGCCCTCCTGTTAGGGGGTCGTTTTAG

GIS

Geographic origin

Collection site of this record, with other documented records of the same species.

Loading map of Oman…
Qurum, Muscat · Mangrove margin, urban park · 14 records of this speciesOpen geographic explorer

Research

Research & publications

Projects and literature linked to this resource.

Data provenance

  1. Original observation

    Collected by A. Al-Harthy, 2019-04-26

  2. Curated record

    National Heritage Collection (Demo)

  3. Generated research data

    Molecular characterization (demo)

No publications linked

Publications citing this record will appear here once they are added by the holding institution.

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