Fungi — representative image for Aspergillus niger
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Aspergillus niger

Black mould

Culture number: OMC-0020 · Record ID: OMN-MIC-0020

Genus
Aspergillus
Culture category
Fungi
Host / substrate
Date palm
Collection date
2015-06-13
Location
Qurum, Muscat
Holding institution
University Microbiology Lab (Demo)

Overview

Culture identity

All values on this page are synthetic demonstration data, generated for this prototype.

Scientific classification

FungiAscomycotaEurotiomycetesEurotialesAspergillaceaeAspergillusAspergillus niger
Record type
Microbial culture
Strain type
Cryopreserved strain
Batches
2
Molecular status
Sequenced (demo)

Resource network

This record

OMC-0020

Each node jumps to its section on this page.

Host & source

Isolation origin

Where this culture was isolated from. A source relationship is documented fact — it does not by itself prove the organism caused any observed symptoms.

Biological host

Date palm

Phoenix dactylifera

Substrate
Decaying date fruit
Plant part
Fruit
Source type
Host-associated
DATE PALM↓ source of isolationCULTURE OMC-0020↓MOLECULAR DATA

Plant part / sample

Leaf Stem Root Seed Fruit Fruit surface

The highlighted structure is the recorded isolation source.

No disease symptoms recorded

No symptoms were documented on the source material, and this organism is not assumed to be pathogenic.

Collection

Geographic origin

The recorded collection location of this culture.

Loading map of Oman…
Qurum, Muscat · collected 2015-06-13 by K. Al-BusaidiOpen geographic explorer

Culture management

Culture lifecycle

Documented batches and transfer events for this culture, in chronological order.

Current status

Active — cryopreserved backup held

Culture number
OMC-0020
Batches
2
Transfer events
1

Batch explorer

Select a batch to jump to its event in the timeline.

Transfer history

2015-06-18 · batch B2015-039

Culture registered

Registered at University Microbiology Lab (Demo) as culture OMC-0020.

Batch numbers and transfer dates are synthetic demonstration values; no viability, preservation-method or storage-condition data is claimed beyond what is shown.

Molecular data

Genomic explorer

Markers, sequence files and DNA barcodes linked to this culture. Marker availability follows the organism group — not every culture has ITS or TEF data.

Molecular markers

Sequenced (demo)
Marker
Internal transcribed spacer (ITS1-5.8S-ITS2)
Type
Nuclear ribosomal barcode
Sequence ID
OMN-MIC-0020_ITS
Length
600 bp

Synthetic demonstration sequence — not a real sequencing result.

Sequence viewer · ITS

1GAGAGTCCTGTTGTGCGCGACTCCATACAATTAGCAGACCCATAGTAAGTTAGGCCACGC
61CTCGGTAAAATCGTCATCATGACATCGAATCACTAGCGAACCTTGGTAACCGAACCATAC
121GAATGGGTCGTACGACTTCGCTAAGGACCTGAACTGTCCATCAATACCATCTATGATGAC
181CATTTGGCGCTTAAGCGGGCGCACTGATCTCGAGGTACGGACCCGCACTCCCGTGCCCCC
241GCAGTCGAGTTTCATAACACGAATACACGGCGGCGGGATCTGGTTTTAGTCCGTTCACGC
301AAATGGGTTCTACTTAATAGAGTGTAGTGTGAGCTCGCCGAAACTTTATCGATACCCATA
361TGATTCGGCGGGTTCTAAAGGTTAACTGGAATCCACTTCTATAGCCGGCTAACATGATAC
421CATTTCCTCTATATAATATATCGAGCATACCAAGCGCCGTTTCTGATGAGATGGACGTGT
481CTAGTAATCATAATAATTGACAGTTGACTCCGTCAAAAATCATATGCGAACTGGAGTACA
541GAATCGATCGAGAAGGCATAGGAGCACTTGCATAACGCCTCCAAGCCTAGAGAGAATGAG

Genomic file library

OMN-MIC-0020_ITS.fasta

FASTA · marker ITS · synthetic demonstration file

OMN-MIC-0020_TEF.fasta

FASTA · marker TEF · synthetic demonstration file

Research

Research & provenance

How this record came to be, and literature linked to it.

Data provenance

  1. Isolation

    Isolated from date palm at Qurum, 2015-06-13

  2. Culture registration

    University Microbiology Lab (Demo) · 2015-06-18

  3. Culture management

    2 batches · 1 transfers (demo)

  4. Molecular data

    ITS / TEF (demo)

No publications linked

Publications citing this culture will appear here once they are added by the holding institution.

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