Bacteria — representative image for Pseudomonas putida
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Pseudomonas putida

Soil pseudomonad

Culture number: OMC-0119 · Record ID: OMN-MIC-0119

Genus
Pseudomonas
Culture category
Bacteria
Host / substrate
Irrigated soil
Collection date
2021-07-15
Location
Khasab, Musandam
Holding institution
National Heritage Collection (Demo)

Overview

Culture identity

All values on this page are synthetic demonstration data, generated for this prototype.

Scientific classification

BacteriaPseudomonadotaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonasPseudomonas putida
Record type
Microbial culture
Strain type
Lyophilised strain
Batches
2
Molecular status
Sequenced (demo)

Resource network

This record

OMC-0119

Each node jumps to its section on this page.

Host & source

Isolation origin

Where this culture was isolated from. A source relationship is documented fact — it does not by itself prove the organism caused any observed symptoms.

Environmental substrate

Irrigated soil

Substrate
Falaj-irrigated garden soil
Source type
Environmental
IRRIGATED SOIL↓ source of isolationCULTURE OMC-0119↓MOLECULAR DATA

No disease symptoms recorded

No symptoms were documented on the source material, and this organism is not assumed to be pathogenic.

Collection

Geographic origin

The recorded collection location of this culture.

Loading map of Oman…
Khasab, Musandam · collected 2021-07-15 by S. Al-RawahiOpen geographic explorer

Culture management

Culture lifecycle

Documented batches and transfer events for this culture, in chronological order.

Current status

Active — cryopreserved backup held

Culture number
OMC-0119
Batches
2
Transfer events
1

Batch explorer

Select a batch to jump to its event in the timeline.

Transfer history

2021-08-13 · batch B2021-087

Culture registered

Registered at National Heritage Collection (Demo) as culture OMC-0119.

Batch numbers and transfer dates are synthetic demonstration values; no viability, preservation-method or storage-condition data is claimed beyond what is shown.

Molecular data

Genomic explorer

Markers, sequence files and DNA barcodes linked to this culture. Marker availability follows the organism group — not every culture has ITS or TEF data.

Molecular markers

Sequenced (demo)
Marker
16S ribosomal RNA gene
Type
Ribosomal barcode
Sequence ID
OMN-MIC-0119_16S
Length
1450 bp

Synthetic demonstration sequence — not a real sequencing result.

Sequence viewer · 16S

1AGCGGTTGTGTCAACAGTTATAGAGTCAACAAAAGCATTGCGCCAGAGGCTAAACTTGTG
61AGTGGAGTGATACGTTGACGCATAATATTCCCTTGTTTGGCTTCGCGTACCTTGTTTATA
121TTGATAGTTCTTGTCCTTGTTGTGCGTCGATCTTTACCTGTCTAGTCGCACGTACTACAG
181TATAGTTACACTAATAGGCAATTCCCGCGCGATAATTCGCTGACAAATTGGTTGCATCCG
241ACTGGATTTCCAGATCCACTACTGACACTGCCGCCGCTCTAGGTTGGGGGCATTAGTACA
301GAAAAAAGGGTCACCCAATACATAGTGTACACCGCGGTTTGCGTAGACAAAGTTCCTTTT
361TGGCCAGAGGTCAAGATTACTGCGAAGGTAGTAAATTGCGTCTGGTAGAGCCTAGACGCA
421AGGCATTCATCTTTTCAGATACCGGAACCATCAAAGAATGAGAATCCTATTGTACTCTCC
481TTCGGTATTACCACACGGGAGCCCTGGGGTCGGGTAGACGTACTTGTACCTGCCTGTTTT
541TTCATAGTCGGCGCACGGGCTAACTGTGGGCCTGAAGGTAGCGCGTAGTGATCGGCCAGG
601ACCACCTACGCACTACACAAATTTTCGTCCCAGACCGCTTGGCCGTAGTAAAGCTTCATT
661GTACGCATAAAACAACTAGCAAGTCATTGGGGTACTTAACGAGTCATCAGTCTTCGCGTG
721AAAGTGCACTTCTCATCTACAGCCCGTTTTGTCACTAACAGAGGTTTTAGGCGGCCTCAG
781TACCTGCTGCCGCCGGTTGGGGAGGGCACCCGTCCCGGGGAAGGAGGCGGTATTTCGCAA
841TAAAAGGAAGGAGAACCACTCCTAGCTAGATACTCTGACCACGACCACTGTATTTTTGAA
901ATGCGGCTGACTATATAGTTACAAGTAGTTGGTAGTATGACTGGCGGAGAAATTGCTCCA
961GAAGATGTAACTCTAGCACAGGTGTGATTTCGATGCTGCCCTCTAAAGAGTCAACGAAAG
1021ATACCTTGTGTGTTTTGCCAGCCTCCGATGGGGGAATGTCCCTGGTTCAATCCGGGGCGC
1081TGTTTTGAGTCGAGGTGAGGTACTATAGATATTGGGTCTATTCTACTTATGAAGGAATCT
1141ATCGGCTGGGCCAGGAGGCGATTCTGGTTAAATGGAAGTGCATTGACATATTGACATTTG
1201ATGAAAGTGTAGATGGCCTACCTATATAGTAGGACTTCACTGTCGTTGACCCTAGAACCT
1261GTGGGGACATCTGGTAACTTCTGCGGATGTGTTCACACCAATCGTAGCACGGACGCGCCA
1321GGGAGGCAAGCTGTACAGACTTCACTGACCAGTTGAATGTGGGCCGGACACGGCGAGTCA
1381TTATTGGTCGGTAGAAGCCATCCTGATTTTTCTGGCGGCCTGCAACTAGAACGAGTCAAG
1441CTCGGTTCCC

Genomic file library

OMN-MIC-0119_16S.fasta

FASTA · marker 16S · synthetic demonstration file

Research

Research & provenance

How this record came to be, and literature linked to it.

Data provenance

  1. Isolation

    Isolated from irrigated soil at Khasab, 2021-07-15

  2. Culture registration

    National Heritage Collection (Demo) · 2021-08-13

  3. Culture management

    2 batches · 1 transfers (demo)

  4. Molecular data

    16S (demo)

No publications linked

Publications citing this culture will appear here once they are added by the holding institution.

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