Representative Marine microorganisms
Representative marine microorganisms image — not this exact specimenMarine microorganism
Marine microorganismsRestricted Demonstration data

Trichodesmium erythraeum

Sea sawdust

Accession: OMN-MAR-0016

Family
Microcoleaceae
Category
Marine microorganisms
Geographic origin
Ras al Jinz, Ash Sharqiyah
Sampling depth
0.4 m
Collection date
2018-08-26
Holding institution
Marine Science Centre (Demo)

Overview

Scientific identity

All values on this page are synthetic demonstration data, generated for this prototype.

Taxonomy

BacteriaCyanobacteriotaCyanophyceaeOscillatorialesMicrocoleaceaeTrichodesmiumTrichodesmium erythraeum

Cell morphology

Filamentous bundles (trichomes) visible under the microscope.

Culture appearance

Forms surface films on enriched seawater medium

Resource network

This record

OMN-MAR-0016

Each node jumps to its section on this page.

GIS & sampling

Sampling location & depth

This record is restricted: its location is shown generalised to protect sensitive material.

Loading map of Oman…
Ras al Jinz, Ash Sharqiyah · Exposed rocky coast · 12 records of this speciesOpen geographic explorer

Sampling depth explorer

0 m50 m

0.4 m · this record

0 m50 m

1.7 m

0 m50 m

3.9 m

0 m50 m

2.3 m

0 m50 m

0 m

Recorded depth
0.4 m
Sampling method
Water-column sampling (plankton net / Niskin bottle)

Schematic depth scale — no bathymetric profile is claimed. Other columns are recorded depths of the same species (demo).

Environment

Water conditions at sampling

Single set of measurements recorded during the sampling event on 2018-08-26 — not a monitoring series.

Water temperature

29.6 °C

Recorded at sampling · Ras al Jinz, Ash Sharqiyah

Sampling depth 0.4 m · Water-column sampling (plankton net / Niskin bottle)

Values are synthetic demonstration measurements with realistic units; no time series exists to chart.

Genomics

Genomic data

DNA barcodes and sequence records linked to this specimen. Sequences are synthetic demonstration output, not real results.

DNA barcodeBOLD:DEMO0016· demonstration barcode identifier, no external database record

Molecular markers

Sequenced (demo)
Marker
16S ribosomal RNA gene
Type
Ribosomal barcode
Sequence ID
OMN-MAR-0016_16S
Length
1450 bp

Synthetic demonstration sequence — not a real sequencing result.

Sequence viewer · 16S

1GTTAACCATCCAAAGATGCCGTCTTGCCTCTAGGTCAACTATGATGTACCGCACTTTGAG
61GCGTTATCTAGCGCTTAGGTAGCCCTTGCAAATTGGGACGACCAAAGTACGGAACCGATA
121TGGGCACCCAGAACATGCAGACTTTTCAACTAAAAAGTTCGCCTCTGTACAACCCGGCAT
181CAATAATTGTGATTAGAGCCCTGCTCCGGGTGAAACGAAATATAGGCTCGACAGGTGGTG
241GTTGGATTGACGGTGGGCCAATATACCTATCTGAGCGCAATAAGCTAAGAAAAAATAGTA
301CCTAGTTTTGACGCGACATCCGTATTTAATCCCCGCTGACAAGCAATCTTAATGCGTGAG
361CTGCGATGGGTAATGCCCCCCAACTGGGGTAAGAACACCGAGACTCTGATGTAACCCGGA
421ATTACTTATACCCACCATCGTGTTGAGCGTCGCGTTCTCGAAATATCGCGGCCGCACACT
481CAAGCTCGCCTTAGAGGGGCCCTCCGAAGGTCCAGCGGAGGCTCACATGGCGTAACCCCG
541ATAACAGCTATAAGCCATCCGTTGTGAAGTACTAACTCACCACAAAGCATTCAGCCCAGT
601TGGAGGAACCCTGCTAATGGTGTTTAGGATTGTCACTCCTAGTTCCACGCCCTCCTTATA
661ACAAGGATCACGTCACTATAACCGCCGCTTGTCATGGTTAAGGGTGCGGTCATACCCCAC
721TAATAGCTCTGCAGATAGTTTCCACGTGACAACTAGGCATATATGACACTCTGCAATGGT
781AGTCAATTGTCTCCATGCGGTTTTAGAAGAGAATGCGGAATGTCAGTGATTGCACCTGTT
841GTCAGATTGTTCCTTAGCTGATTCGGGCTATATAGCCGCTAACGACAAACGCACCGCATA
901TGTTTTTATGCGTGCAGGCAGCATAAGCGCTGTAATTGGATAGAACGCATTGATCAATTT
961CTTTCAGTACTCTCCTAGTATAGGCGTAACCGTGATGGAACCAAGGCGTATATAAGGGTT
1021TGGTAAAAAGGACCAGTACGGAAATTCTTGGCAAAGGGGCACACGTAGCAGACCCATACC
1081TTCACCAAGTGGACGGTCTATGTACATAAGCTCAACGAAGTTGTCGGTGAAGTTCTAGGA
1141GGGTCCTGAACGGGATGCATATCTCCTGCCCATCTTCGCGCCTTATTGACAAACCATAGT
1201CGGGTCCGTGCTCGACTCAACGTTTGCAGCGCGCTGTTCGGACTGATAGCTCTTTACATG
1261TAAACACGTCCATGATCGCATACGACCGTATTTTCATGAATCCACATCTACTAATAGGTA
1321TCGTCTCAACTGACTTATGAGCAAAGGAAAGCTAGGTAGTGTAGTTATGTATTCCTATCA
1381TGTCAGGGGCATTCATGCCGGATATACCAAAACGAGGTCTCAGGAAACCACTTTCTATCT
1441TGCGGTCTAG

Biobank

Physical sample preservation

Registered material from this specimen and how it is preserved. Exact freezer positions and rack locations are restricted to authorized staff.

Preserved samples

1

−80 °C / LN₂

1

Holding laboratories

1

Available

1

Available

Cryopreserved culture

TIS-M-0016

Preservation
−80 °C freezer
Quantity
1 tubes
Preserved
2018-10-13

National Heritage Collection — Store (Demo)

Sample lifecycle

01 Field sampling02 Registration03 Preservation04 Molecular work

2018-08-26 · Field sampling — Ras al Jinz, Ash Sharqiyah — water sample at 0.4 m.

2018-09-11 · Registration — Registered at Marine Science Centre (Demo) as OMN-MAR-0016.

2018-09-11 · Preservation — Material preserved: −80 °C freezer.

2018-10-13 · Molecular work — DNA extraction and barcoding (demo).

Sample identifiers, quantities and laboratories are synthetic demonstration values; no storage monitoring history is claimed.

Research

Research & provenance

How this record came to be, and literature linked to it.

Data provenance

  1. Sampling event

    Ras al Jinz, 2018-08-26 · 0.4 m · by M. Al-Balushi

  2. Curated record

    Marine Science Centre (Demo)

  3. Preserved material

    1 sample across 1 laboratories (demo)

  4. Research data

    DNA barcoding (demo)

No publications linked

Publications citing this specimen will appear here once they are added by the holding institution.

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