Trichodesmium erythraeum
Sea sawdust
Accession: OMN-MAR-0026
- Family
- Microcoleaceae
- Category
- Marine microorganisms
- Geographic origin
- Bandar Khayran, Muscat
- Sampling depth
- 1.4 m
- Collection date
- 2012-09-19
- Holding institution
- Marine Science Centre (Demo)
Overview
Scientific identity
All values on this page are synthetic demonstration data, generated for this prototype.
Taxonomy
Cell morphology
Filamentous bundles (trichomes) visible under the microscope.
Culture appearance
Turbid growth in liquid medium
Resource network
This record
OMN-MAR-0026
Each node jumps to its section on this page.
GIS & sampling
Sampling location & depth
Where this organism was collected, and at what depth in the water column.
Sampling depth explorer
1.4 m · this record
1.7 m
3.9 m
2.3 m
0 m
- Recorded depth
- 1.4 m
- Sampling method
- Water-column sampling (plankton net / Niskin bottle)
Schematic depth scale — no bathymetric profile is claimed. Other columns are recorded depths of the same species (demo).
Environment
Water conditions at sampling
Single set of measurements recorded during the sampling event on 2012-09-19 — not a monitoring series.
Water temperature
30.9 °C
Recorded at sampling · Bandar Khayran, Muscat
Sampling depth 1.4 m · Water-column sampling (plankton net / Niskin bottle)
Values are synthetic demonstration measurements with realistic units; no time series exists to chart.
Genomics
Genomic data
DNA barcodes and sequence records linked to this specimen. Sequences are synthetic demonstration output, not real results.
Molecular markers
Sequenced (demo)- Marker
- 16S ribosomal RNA gene
- Type
- Ribosomal barcode
- Sequence ID
- OMN-MAR-0026_16S
- Length
- 1450 bp
Synthetic demonstration sequence — not a real sequencing result.
Sequence viewer · 16S
Biobank
Physical sample preservation
Registered material from this specimen and how it is preserved. Exact freezer positions and rack locations are restricted to authorized staff.
Preserved samples
1
−80 °C / LN₂
1
Holding laboratories
1
Available
1
Cryopreserved culture
TIS-M-0026
- Preservation
- −80 °C freezer
- Quantity
- 3 tubes
- Preserved
- 2012-10-17
University Microbiology Lab (Demo)
Sample lifecycle
2012-09-19 · Field sampling — Bandar Khayran, Muscat — water sample at 1.4 m.
2012-09-29 · Registration — Registered at Marine Science Centre (Demo) as OMN-MAR-0026.
2012-09-29 · Preservation — Material preserved: −80 °C freezer.
2012-10-17 · Molecular work — DNA extraction and barcoding (demo).
Sample identifiers, quantities and laboratories are synthetic demonstration values; no storage monitoring history is claimed.
Research
Research & provenance
How this record came to be, and literature linked to it.
Data provenance
Sampling event
Bandar Khayran, 2012-09-19 · 1.4 m · by M. Al-Balushi
Curated record
Marine Science Centre (Demo)
Preserved material
1 sample across 1 laboratories (demo)
Research data
DNA barcoding (demo)
No publications linked
Publications citing this specimen will appear here once they are added by the holding institution.
More marine microorganisms
Trichodesmium erythraeum
OMN-MAR-0003 · Mirbat
Trichodesmium erythraeum
OMN-MAR-0006 · Duqm
Trichodesmium erythraeum
OMN-MAR-0009 · Ras al Jinz
Trichodesmium erythraeum
OMN-MAR-0012 · Hallaniyat Islands
Trichodesmium erythraeum
OMN-MAR-0016 · Ras al Jinz
Vibrio alginolyticus
OMN-MAR-0033 · Mirbat
Vibrio alginolyticus
OMN-MAR-0034 · Daymaniyat Islands
Vibrio alginolyticus
OMN-MAR-0037 · Ras al Jinz