Fungi — representative image for Alternaria alternata
Representative fungi image — not this exact cultureMicrobial culture
FungiAvailable Demonstration data

Alternaria alternata

Leaf spot fungus

Culture number: OMC-0055 · Record ID: OMN-MIC-0055

Genus
Alternaria
Culture category
Fungi
Host / substrate
Omani lime
Collection date
2019-07-08
Location
Salalah, Dhofar
Holding institution
Arid Lands Research Unit (Demo)

Overview

Culture identity

All values on this page are synthetic demonstration data, generated for this prototype.

Scientific classification

FungiAscomycotaDothideomycetesPleosporalesPleosporaceaeAlternariaAlternaria alternata
Record type
Microbial culture
Strain type
Cryopreserved strain
Batches
2
Molecular status
Sequenced (demo)

Resource network

This record

OMC-0055

Each node jumps to its section on this page.

Host & source

Isolation origin

Where this culture was isolated from. A source relationship is documented fact — it does not by itself prove the organism caused any observed symptoms.

Biological host

Omani lime

Citrus aurantiifolia

Substrate
Leaf tissue
Plant part
Leaf
Source type
Host-associated
OMANI LIME↓ source of isolationCULTURE OMC-0055↓MOLECULAR DATA

Plant part / sample

Leaf Stem Root Seed Fruit Fruit surface

The highlighted structure is the recorded isolation source.

Disease symptoms recorded on source

Documented

Necrotic leaf spots with chlorotic halos recorded on the source leaf.

Anatomical location: Leaf lamina

Symptoms were observed on the source material. The presence of this organism does not prove it caused the symptoms — no diagnosis is implied.

Collection

Geographic origin

The recorded collection location of this culture.

Loading map of Oman…
Salalah, Dhofar · collected 2019-07-08 by M. Al-BalushiOpen geographic explorer

Culture management

Culture lifecycle

Documented batches and transfer events for this culture, in chronological order.

Current status

Active — maintained on medium

Culture number
OMC-0055
Batches
2
Transfer events
1

Batch explorer

Select a batch to jump to its event in the timeline.

Transfer history

2019-07-15 · batch B2019-062

Culture registered

Registered at Arid Lands Research Unit (Demo) as culture OMC-0055.

Batch numbers and transfer dates are synthetic demonstration values; no viability, preservation-method or storage-condition data is claimed beyond what is shown.

Molecular data

Genomic explorer

Markers, sequence files and DNA barcodes linked to this culture. Marker availability follows the organism group — not every culture has ITS or TEF data.

Molecular markers

Sequenced (demo)
Marker
Internal transcribed spacer (ITS1-5.8S-ITS2)
Type
Nuclear ribosomal barcode
Sequence ID
OMN-MIC-0055_ITS
Length
600 bp

Synthetic demonstration sequence — not a real sequencing result.

Sequence viewer · ITS

1CTAACAACTCTCTGCTCGACGCGTCTCAAACAGCCACGCCTCTTTCTGCGGACATGGTGT
61ATTAAACTCGGTACACGAGCATCTGCAACGGATCGCGATCCACTCGGCTGTAAACGTATC
121CCTCAGCTGGCAAGATCACCGGAGAGCATACTAGAATTGGAACCTTATAGGGCATAGCGT
181ACGAACTAGACAGCCCATTTGTCTAGAGGTCATGGGCGATGTGGTCAGCGTGCCCGCTCC
241GCACCTCTCGTGACTCACGAGTTGAGGATTCCTATAATTAATTCTCAGCAGGCATTAGGG
301CTCAGAATATGGTATCGCTGAGCGTATAGCGCCCGATCTTCCTCTTTCGCTCGGGAAGTC
361GTTCCACTGGGAGAGCGGTGTTAGTTATGGATCGAGTTTGCAAAAGGTGGAAGGAGTCGC
421CTGTGGAGCCGGCGTATCACATGTAAAGGTCTCTGACTGTTTATATAACGCGTGCCCTTT
481CCCTTAACTCATATGTGCCGGCCGGCCTCGGCTAATGAATAGCTTTATTAATTCCTTCTC
541TCAAATTAAGATACGCAGTCGACGTCCGAGGATTCATGGTACCCCAGAGTGTTGAAGCGC

Genomic file library

OMN-MIC-0055_ITS.fasta

FASTA · marker ITS · synthetic demonstration file

Research

Research & provenance

How this record came to be, and literature linked to it.

Data provenance

  1. Isolation

    Isolated from omani lime at Salalah, 2019-07-08

  2. Culture registration

    Arid Lands Research Unit (Demo) · 2019-07-15

  3. Culture management

    2 batches · 1 transfers (demo)

  4. Molecular data

    ITS (demo)

No publications linked

Publications citing this culture will appear here once they are added by the holding institution.

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