Fungi — representative image for Fusarium oxysporum
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FungiOn request Demonstration data

Fusarium oxysporum

Soil fusarium

Culture number: OMC-0087 · Record ID: OMN-MIC-0087

Genus
Fusarium
Culture category
Fungi
Host / substrate
Date palm
Collection date
2023-07-16
Location
Ibri, Az Zahirah
Holding institution
University Microbiology Lab (Demo)

Overview

Culture identity

All values on this page are synthetic demonstration data, generated for this prototype.

Scientific classification

FungiAscomycotaSordariomycetesHypocrealesNectriaceaeFusariumFusarium oxysporum
Record type
Microbial culture
Strain type
Cryopreserved strain
Batches
4
Molecular status
Sequenced (demo)

Resource network

This record

OMC-0087

Each node jumps to its section on this page.

Host & source

Isolation origin

Where this culture was isolated from. A source relationship is documented fact — it does not by itself prove the organism caused any observed symptoms.

Biological host

Date palm

Phoenix dactylifera

Substrate
Root tissue
Plant part
Root
Source type
Host-associated
DATE PALM↓ source of isolationCULTURE OMC-0087↓MOLECULAR DATA

Plant part / sample

Leaf Stem Root Seed Fruit Fruit surface

The highlighted structure is the recorded isolation source.

Disease symptoms recorded on source

Documented

Vascular discoloration and wilting of lower fronds recorded on the source palm.

Anatomical location: Root and lower crown

Symptoms were observed on the source material. The presence of this organism does not prove it caused the symptoms — no diagnosis is implied.

Collection

Geographic origin

The recorded collection location of this culture.

Loading map of Oman…
Ibri, Az Zahirah · collected 2023-07-16 by F. Al-HinaiOpen geographic explorer

Culture management

Culture lifecycle

Documented batches and transfer events for this culture, in chronological order.

Current status

Active — lyophilised ampoules held

Culture number
OMC-0087
Batches
4
Transfer events
3

Batch explorer

Select a batch to jump to its event in the timeline.

Transfer history

2023-07-25 · batch B2023-087

Culture registered

Registered at University Microbiology Lab (Demo) as culture OMC-0087.

Batch numbers and transfer dates are synthetic demonstration values; no viability, preservation-method or storage-condition data is claimed beyond what is shown.

Molecular data

Genomic explorer

Markers, sequence files and DNA barcodes linked to this culture. Marker availability follows the organism group — not every culture has ITS or TEF data.

Molecular markers

Sequenced (demo)
Marker
Internal transcribed spacer (ITS1-5.8S-ITS2)
Type
Nuclear ribosomal barcode
Sequence ID
OMN-MIC-0087_ITS
Length
600 bp

Synthetic demonstration sequence — not a real sequencing result.

Sequence viewer · ITS

1AGACGCCTGAAACACCGGATTAAGTTACGAATTAGCTGGAGTGTGGACGAAAAAAGAGTA
61TAGCCTGGTTTTCCTACCCGACCTCATGGGGTTGGTCCTTGCAAATGCTTCTGCCAGTCA
121GTGGGTGATGGGTGCCAGGAACAAGCCTTTTGCTTTTTCTTTACTACCATATGCAATTAC
181CCCCGCTGCAATGACAATGCCGGAATTGAGATGAGTTGGGATCGAACACCTATGTTGCCA
241ACACCGACACGATGATATGATCGATACCGGGCGCGAGTAATCCATAAGTTAACAGCCCAA
301GGCGAAGCATTACCCGTCCCCGCCCTGAGCGACTGTTAAAGTTTATTCCCCATATTGAAC
361ACATTGCTTATTATCGGCCAGACCATTAGCGAATAAGCCACCACTGCTTATCGTACATCA
421CTAAAAACCTCAGGTCGCGCACGCTATTGTTCGGTCCAACCATTAACTCCATACCCTCAC
481TATTTGTGAACTTCAAAATCAGCAATCCGCCGTCGCCCAGGCTGAGAGTGATAAATGACG
541ATACCCTCTCTGATCCCGATTTATGTCGCCTGCTTTATGATTCTCAATTGGGTCCGGATT

Genomic file library

OMN-MIC-0087_ITS.fasta

FASTA · marker ITS · synthetic demonstration file

OMN-MIC-0087_TEF.fasta

FASTA · marker TEF · synthetic demonstration file

Research

Research & provenance

How this record came to be, and literature linked to it.

Data provenance

  1. Isolation

    Isolated from date palm at Ibri, 2023-07-16

  2. Culture registration

    University Microbiology Lab (Demo) · 2023-07-25

  3. Culture management

    4 batches · 3 transfers (demo)

  4. Molecular data

    ITS / TEF (demo)

No publications linked

Publications citing this culture will appear here once they are added by the holding institution.

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