Fungi — representative image for Alternaria alternata
Representative fungi image — not this exact cultureMicrobial culture
FungiAvailable Demonstration data

Alternaria alternata

Leaf spot fungus

Culture number: OMC-0089 · Record ID: OMN-MIC-0089

Genus
Alternaria
Culture category
Fungi
Host / substrate
Omani lime
Collection date
2018-06-25
Location
Rustaq, Al Batinah
Holding institution
University Microbiology Lab (Demo)

Overview

Culture identity

All values on this page are synthetic demonstration data, generated for this prototype.

Scientific classification

FungiAscomycotaDothideomycetesPleosporalesPleosporaceaeAlternariaAlternaria alternata
Record type
Microbial culture
Strain type
Live culture
Batches
2
Molecular status
Sequenced (demo)

Resource network

This record

OMC-0089

Each node jumps to its section on this page.

Host & source

Isolation origin

Where this culture was isolated from. A source relationship is documented fact — it does not by itself prove the organism caused any observed symptoms.

Biological host

Omani lime

Citrus aurantiifolia

Substrate
Leaf tissue
Plant part
Leaf
Source type
Host-associated
OMANI LIME↓ source of isolationCULTURE OMC-0089↓MOLECULAR DATA

Plant part / sample

Leaf Stem Root Seed Fruit Fruit surface

The highlighted structure is the recorded isolation source.

Disease symptoms recorded on source

Documented

Necrotic leaf spots with chlorotic halos recorded on the source leaf.

Anatomical location: Leaf lamina

Symptoms were observed on the source material. The presence of this organism does not prove it caused the symptoms — no diagnosis is implied.

Collection

Geographic origin

The recorded collection location of this culture.

Loading map of Oman…
Rustaq, Al Batinah · collected 2018-06-25 by A. Al-HarthyOpen geographic explorer

Culture management

Culture lifecycle

Documented batches and transfer events for this culture, in chronological order.

Current status

Active — cryopreserved backup held

Culture number
OMC-0089
Batches
2
Transfer events
1

Batch explorer

Select a batch to jump to its event in the timeline.

Transfer history

2018-07-01 · batch B2018-070

Culture registered

Registered at University Microbiology Lab (Demo) as culture OMC-0089.

Batch numbers and transfer dates are synthetic demonstration values; no viability, preservation-method or storage-condition data is claimed beyond what is shown.

Molecular data

Genomic explorer

Markers, sequence files and DNA barcodes linked to this culture. Marker availability follows the organism group — not every culture has ITS or TEF data.

Molecular markers

Sequenced (demo)
Marker
Internal transcribed spacer (ITS1-5.8S-ITS2)
Type
Nuclear ribosomal barcode
Sequence ID
OMN-MIC-0089_ITS
Length
600 bp

Synthetic demonstration sequence — not a real sequencing result.

Sequence viewer · ITS

1CCGACCAATAGGTGGTCGGTCATGCAAGCGCTTTATATTTTGTGCATTTGGAGGATTAAG
61TATACTTCAGGCACTACGGGTCACCCACGACGAGGGGTGGATCGCGCCTATAACGTAGGA
121ATCAAGCGGAAATAATCTGTCACAGCACAGTTGTTCCTCCTAAACTCACATTCTTTCTGT
181CTACCGATGCTTTCAGCCATCCCCCTAACCCTGGTACACACTACAGAGGCTTGCATGAAG
241CTATATATTTAATGGGACAAAGACATCATACAATAGTTAGGCAGTCTCAAGACTTTGCCC
301ACCGCTTAGTATGGACGGTCAAAGCAACAGGCCCATGTTCGGCTTAAATGGAGGACCCTC
361CTCGATTACATAGGCCGCTAATCACCCACTCAAAAGTTACATTATGTGTGAAGGTTAACA
421TGACCTTGTTCGACCGTCAATGCGAGACCTCTAAACCTTAGCTACGCCACCAACTTATAT
481ATGCCGTAATATGTCCACGCATGGTGATGGGCGCACGGTGTCTTATTCTCCGATGGTTCT
541CTCTAGGCTAAAGCCCCGGGTGTATAGACCTTAAAAAACCTCTAAGTATTTCCCAGCGCT

Genomic file library

OMN-MIC-0089_ITS.fasta

FASTA · marker ITS · synthetic demonstration file

OMN-MIC-0089_TEF.fasta

FASTA · marker TEF · synthetic demonstration file

Research

Research & provenance

How this record came to be, and literature linked to it.

Data provenance

  1. Isolation

    Isolated from omani lime at Rustaq, 2018-06-25

  2. Culture registration

    University Microbiology Lab (Demo) · 2018-07-01

  3. Culture management

    2 batches · 1 transfers (demo)

  4. Molecular data

    ITS / TEF (demo)

No publications linked

Publications citing this culture will appear here once they are added by the holding institution.

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