Representative Marine microorganisms
Representative marine microorganisms image — not this exact specimenMarine microorganism
Marine microorganismsOn request Demonstration data

Trichodesmium erythraeum

Sea sawdust

Accession: OMN-MAR-0082

Family
Microcoleaceae
Category
Marine microorganisms
Geographic origin
Masirah Island, Ash Sharqiyah
Sampling depth
2.3 m
Collection date
2012-04-13
Holding institution
University Microbiology Lab (Demo)

Overview

Scientific identity

All values on this page are synthetic demonstration data, generated for this prototype.

Taxonomy

BacteriaCyanobacteriotaCyanophyceaeOscillatorialesMicrocoleaceaeTrichodesmiumTrichodesmium erythraeum

Cell morphology

Filamentous bundles (trichomes) visible under the microscope.

Culture appearance

Turbid growth in liquid medium

Resource network

This record

OMN-MAR-0082

Each node jumps to its section on this page.

GIS & sampling

Sampling location & depth

Where this organism was collected, and at what depth in the water column.

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Masirah Island, Ash Sharqiyah · Upwelling coast, algal beds · 12 records of this speciesOpen geographic explorer

Sampling depth explorer

0 m50 m

2.3 m · this record

0 m50 m

1.7 m

0 m50 m

3.9 m

0 m50 m

2.3 m

0 m50 m

0 m

Recorded depth
2.3 m
Sampling method
Water-column sampling (plankton net / Niskin bottle)

Schematic depth scale — no bathymetric profile is claimed. Other columns are recorded depths of the same species (demo).

Environment

Water conditions at sampling

Single set of measurements recorded during the sampling event on 2012-04-13 — not a monitoring series.

Water temperature

28.6 °C

Recorded at sampling · Masirah Island, Ash Sharqiyah

Sampling depth 2.3 m · Water-column sampling (plankton net / Niskin bottle)

Values are synthetic demonstration measurements with realistic units; no time series exists to chart.

Genomics

Genomic data

DNA barcodes and sequence records linked to this specimen. Sequences are synthetic demonstration output, not real results.

DNA barcodeBOLD:DEMO0082· demonstration barcode identifier, no external database record

Molecular markers

Sequenced (demo)
Marker
16S ribosomal RNA gene
Type
Ribosomal barcode
Sequence ID
OMN-MAR-0082_16S
Length
1450 bp

Synthetic demonstration sequence — not a real sequencing result.

Sequence viewer · 16S

1GATCCAACTGAATGCATCAACAGGACGCGTCCTTCCGTCGACCCCGTGGGATTTCGCCCT
61GTACCGCAGATTCTAGCTCGACAAAAATGTAGACTGCTGCACTCGGCCCAGAATGGTCCC
121TCTTTTAATGAACTAATAATCCAACCACCAAAGATTCGCTCGATCGCTTTATTACAACTC
181ATGTGTCGAATATTCGGGTCTTTTTCTTCACCACGCGCAGCCGGAAGACGTCTATGCCAA
241TATGCCATTCGGTGCTGGCGGGCAATGGGACTATCCAGCCTTATCAATGAGCTTCCTATA
301GCAAGTTACTGGTGGCTCCTACAGAGGACTTAACCCCCATTGGCCGTGTAACTGGAGAGT
361CGGCTACAGATAAGGCATTTCGTGCTACGAGCACTTCGCATACCAACAGAAAGTGTGGGA
421CGGTGCTATCGGGCTCGTGACGTGGTGAGGTTACGATCATCGATTATGCTGCTTACGAGC
481GCTTTGCTAGTATATATCTACTAGCCGGCAAGCCTTTGAGAAAAGATCGTTTTCCCGGCA
541GTCCCAGAGGACGAGGGCACCTTCATGTCTTGAAACTACGGTCTTCTGGTCGTCCGATCT
601ACGAATGAAACATGTAGCTATAGATGCATTTCCGCTGCTCCGCAAATTCAGTGGGGCTAT
661ATATCCTGGTGTGCTACAACACCTCCAACTAACAGTGTCACAACTTCTTTGGTTCTGTTC
721ATGACTCTTTAGAAAGCTTGAGTGGTTTAAGATCTGTAGCCCTAGGAGGTGGGGCGGGCC
781TGGCTAGCCTAAGAATAATCCTATCACAAGAGGTTCCCAACATTGGTCTCTGGCCATGTT
841TAATAGCTGGGCTGATTTCATGTTCACACTATTGATGTCGTTAAACGTTATTGTGTGTCA
901AGAACGGGCCCGTCTGTAAGACTGAACTCCGGACCTGCAGCAGCACCAACCTCACGGTTC
961AAACCCGCCCTCGCTCGCGGTCGCACTAGCTGACACGAGTGATTTGTCGCAAAGTTCCAG
1021ATAGCGACAATGGCACGTAATTCAGTCGACATAAGCTTTCGCTACAGCAGGAGTCTGGCA
1081AGCTCTGTTGCATCGCAGACGCAGCATACAGAACTACTTGAATGAAGCACAGCTTCAGGC
1141GATATACGAGAGTTCTAAACTTCCTGGACTCTGAACTTAAACGCCTGTCGCAGATAAATT
1201GCCATTTCTAGATTAACACATCCACTAACAACCGATGTTAAACCATTCGCGAGGCCCTCA
1261ATCTACTTGCAGTCAGAACCAGACGGCAGGAACTGTATGTAGACGAAAGAACCTTTACGT
1321GCCCCATGCACCTAACATATTATTTTTATTCTCCATTGCGCGTACCAATTGCGAGCCTCC
1381CTGCGTGCCCCTTTTTATATGGGTTATCTCGGAGCGTTCACTAAGGGGTGTCCCCATCAG
1441AAGTGGTCGT

Biobank

Physical sample preservation

Registered material from this specimen and how it is preserved. Exact freezer positions and rack locations are restricted to authorized staff.

Preserved samples

1

−80 °C / LN₂

1

Holding laboratories

1

Available

0

Reserved

Cryopreserved culture

TIS-M-0082

Preservation
Liquid nitrogen
Quantity
2 tubes
Preserved
2012-06-27

National Heritage Collection — Store (Demo)

Sample lifecycle

01 Field sampling02 Registration03 Preservation04 Molecular work

2012-04-13 · Field sampling — Masirah Island, Ash Sharqiyah — water sample at 2.3 m.

2012-05-01 · Registration — Registered at University Microbiology Lab (Demo) as OMN-MAR-0082.

2012-05-01 · Preservation — Material preserved: Liquid nitrogen.

2012-06-27 · Molecular work — DNA extraction and barcoding (demo).

Sample identifiers, quantities and laboratories are synthetic demonstration values; no storage monitoring history is claimed.

Research

Research & provenance

How this record came to be, and literature linked to it.

Data provenance

  1. Sampling event

    Masirah Island, 2012-04-13 · 2.3 m · by S. Al-Rawahi

  2. Curated record

    University Microbiology Lab (Demo)

  3. Preserved material

    1 sample across 1 laboratories (demo)

  4. Research data

    DNA barcoding (demo)

No publications linked

Publications citing this specimen will appear here once they are added by the holding institution.

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