Representative Marine microorganisms
Representative marine microorganisms image — not this exact specimenMarine microorganism
Marine microorganismsAvailable Demonstration data

Vibrio alginolyticus

Marine vibrio

Accession: OMN-MAR-0084

Family
Vibrionaceae
Category
Marine microorganisms
Geographic origin
Ras al Jinz, Ash Sharqiyah
Sampling depth
1.7 m
Collection date
2017-07-07
Holding institution
University Microbiology Lab (Demo)

Overview

Scientific identity

All values on this page are synthetic demonstration data, generated for this prototype.

Taxonomy

BacteriaPseudomonadotaGammaproteobacteriaVibrionalesVibrionaceaeVibrioVibrio alginolyticus

Cell morphology

Short rod-shaped cells, motile.

Culture appearance

Forms surface films on enriched seawater medium

Resource network

This record

OMN-MAR-0084

Each node jumps to its section on this page.

GIS & sampling

Sampling location & depth

Where this organism was collected, and at what depth in the water column.

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Ras al Jinz, Ash Sharqiyah · Exposed rocky coast · 11 records of this speciesOpen geographic explorer

Sampling depth explorer

0 m50 m

1.7 m · this record

0 m50 m

3.3 m

0 m50 m

0.1 m

0 m50 m

2.9 m

0 m50 m

2.1 m

Recorded depth
1.7 m
Sampling method
Water-column sampling (plankton net / Niskin bottle)

Schematic depth scale — no bathymetric profile is claimed. Other columns are recorded depths of the same species (demo).

Environment

Water conditions at sampling

Single set of measurements recorded during the sampling event on 2017-07-07 — not a monitoring series.

Water temperature

25.2 °C

Recorded at sampling · Ras al Jinz, Ash Sharqiyah

Sampling depth 1.7 m · Water-column sampling (plankton net / Niskin bottle)

Values are synthetic demonstration measurements with realistic units; no time series exists to chart.

Genomics

Genomic data

DNA barcodes and sequence records linked to this specimen. Sequences are synthetic demonstration output, not real results.

DNA barcodeBOLD:DEMO0084· demonstration barcode identifier, no external database record

Molecular markers

Sequenced (demo)
Marker
16S ribosomal RNA gene
Type
Ribosomal barcode
Sequence ID
OMN-MAR-0084_16S
Length
1450 bp

Synthetic demonstration sequence — not a real sequencing result.

Sequence viewer · 16S

1TGCCCGTCTTTGTGCTCGGCTGGCCAAAAGTTCTGCCATTTCCGCTTGTTCCGGATCTGC
61CCCGTCCTGGCTCTTATGATTGCCGCCTCTCACACTCGAGACAGGAAAGCTCGTGTAATA
121GAGAACTTCTACCTCTACCAATCTTTTATGCGGGGAGCCCAATGGGGCTATCCCGGTCAT
181CGCCGTTGGAAAGACAGGGGGTCTAAACTGGAAGGTGTCAGCACCCGGACTCAAGCATGT
241TACTGTCATTTGCTTACGCACCGGAGTTACGTGTTGCGAATATTTTGGGCGCCCTCTCCA
301CGCATAAGTTCACCCTGCGGAGGGTATTCCTTCGTGGCGCGTCAGTCTGAAAAAGCCTAC
361TAAACCTGATTTCGGTCACGTCCGAGCATCCCAATGACCAGCCCGCACAGTCCTGTCAAG
421AAGACGAGTCACACGCCCCCTAACGCTACTAATATCAAAGCCTAGCTTTAAGCATCATTA
481CCATCCGGCCCGAGCACTAAATCCAGCGCCATGAGACCAATTGTATCGAAATAAGTTAGC
541CACAACTTTTTTCTGTCAGAACTACTGCAGAGACTGGACTGTGTGGAACGGAGGATGAAT
601TCACGGTTCGCAAGCCCGCCTCCTAAGCCTACGGCCCTTCACTGATAAATGGGCCATAGA
661TGATATTACCTACGGATGATGACTATATATAAGTGGCACATCGAGTCTGGGGTGTATGTC
721ATAGCTTTGGGTATGTCTCGCCCCTGAGACGAGTCCCGTGTACTTTTGGTCCCAGTGAAC
781AGGACTGGCTTTGGCATAGTACCCAAAGACTCTACTTGCTTTCTATGTAGGGTGAGGCTC
841TAAACAGCGACACCACTATGGCTAAGGAGTTATGAAACGGTCATATGTTCGCTTGAAGGT
901ATACTTTTACGTCGTACTAGGTCCCCTTAGCTGGTTCAACTGTTCGTGTTCATGTGCCAA
961ACAGGTAAACTTCATCTTGCTCGTAAAGAGTTTCTTGTTGGCTGGTTTCGTATGTTCCGA
1021GAAGTCCTTGGTTTTTAAAACTTTGCTACAGTGCAGTAGTGTACGTAGTAACGCCGATTT
1081CGAGATTGGCATTTATTCACCAAACCGTTAGCCCAGGGGAAATACCCGTCTAGGTATATA
1141TTCAATGGGCCAAATTGCGTATTCGTGCTCCTACTGCAACGACACGCAAGGACAGTTAGT
1201GTTCTGAATTTCTACCCCGCCTTCGAGTTGTATTTCGCAGGAGTCTAGCCATACAGGAAG
1261CCCAGGAAGCTTACAAACAGGACGAGCCTATCTTGTGCTGTACCACTTCCTGGTGAGCAC
1321ACGGACCGTTTGCGCCTGGTAGAATCTGTCTCGACCAGCTTGAGGATAGAGTGACGACAC
1381AGGTCGGGCTGCCAAATCGGATGAATAAGAAGGCTTGATATCCGAACGCAATCACATTAA
1441GTTTACCCGG

Biobank

Physical sample preservation

Registered material from this specimen and how it is preserved. Exact freezer positions and rack locations are restricted to authorized staff.

Preserved samples

1

−80 °C / LN₂

1

Holding laboratories

1

Available

0

Reserved

Cryopreserved culture

TIS-M-0084

Preservation
−80 °C freezer
Quantity
2 tubes
Preserved
2017-08-29

National Heritage Collection — Store (Demo)

Sample lifecycle

01 Field sampling02 Registration03 Preservation04 Molecular work

2017-07-07 · Field sampling — Ras al Jinz, Ash Sharqiyah — water sample at 1.7 m.

2017-07-20 · Registration — Registered at University Microbiology Lab (Demo) as OMN-MAR-0084.

2017-07-20 · Preservation — Material preserved: −80 °C freezer.

2017-08-29 · Molecular work — DNA extraction and barcoding (demo).

Sample identifiers, quantities and laboratories are synthetic demonstration values; no storage monitoring history is claimed.

Research

Research & provenance

How this record came to be, and literature linked to it.

Data provenance

  1. Sampling event

    Ras al Jinz, 2017-07-07 · 1.7 m · by A. Al-Harthy

  2. Curated record

    University Microbiology Lab (Demo)

  3. Preserved material

    1 sample across 1 laboratories (demo)

  4. Research data

    DNA barcoding (demo)

No publications linked

Publications citing this specimen will appear here once they are added by the holding institution.

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