Representative Marine microorganisms
Representative marine microorganisms image — not this exact specimenMarine microorganism
Marine microorganismsAvailable Demonstration data

Vibrio alginolyticus

Marine vibrio

Accession: OMN-MAR-0115

Family
Vibrionaceae
Category
Marine microorganisms
Geographic origin
Bandar Khayran, Muscat
Sampling depth
5 m
Collection date
2020-07-13
Holding institution
Marine Science Centre (Demo)

Overview

Scientific identity

All values on this page are synthetic demonstration data, generated for this prototype.

Taxonomy

BacteriaPseudomonadotaGammaproteobacteriaVibrionalesVibrionaceaeVibrioVibrio alginolyticus

Cell morphology

Short rod-shaped cells, motile.

Culture appearance

Turbid growth in liquid medium

Resource network

This record

OMN-MAR-0115

Each node jumps to its section on this page.

GIS & sampling

Sampling location & depth

Where this organism was collected, and at what depth in the water column.

Loading map of Oman…
Bandar Khayran, Muscat · Sheltered bays, mixed reef · 11 records of this speciesOpen geographic explorer

Sampling depth explorer

0 m50 m

5 m · this record

0 m50 m

3.3 m

0 m50 m

0.1 m

0 m50 m

2.9 m

0 m50 m

2.1 m

Recorded depth
5 m
Sampling method
Water-column sampling (plankton net / Niskin bottle)

Schematic depth scale — no bathymetric profile is claimed. Other columns are recorded depths of the same species (demo).

Environment

Water conditions at sampling

Single set of measurements recorded during the sampling event on 2020-07-13 — not a monitoring series.

Water temperature

25.4 °C

Recorded at sampling · Bandar Khayran, Muscat

Sampling depth 5 m · Water-column sampling (plankton net / Niskin bottle)

Values are synthetic demonstration measurements with realistic units; no time series exists to chart.

Genomics

Genomic data

DNA barcodes and sequence records linked to this specimen. Sequences are synthetic demonstration output, not real results.

DNA barcodeBOLD:DEMO0115· demonstration barcode identifier, no external database record

Molecular markers

Sequenced (demo)
Marker
16S ribosomal RNA gene
Type
Ribosomal barcode
Sequence ID
OMN-MAR-0115_16S
Length
1450 bp

Synthetic demonstration sequence — not a real sequencing result.

Sequence viewer · 16S

1CTATCGCTGGTCACACCGTCCACCCTTGAAAGGAACGGCGGGAATATTCGACAATCACTC
61CATAAACTAGTTACGAATTTTGCACTAACGAGTTCCGGTACGTCCTTAACCATTAAATTA
121TGTTTCAAGGTAACAGTGGCGCACACGGTGTTCTATATCGAGTGGCAAGATATAAGACCA
181ATGAATACCGCCAGTAGCAGCGGGAGCAATGTGGTACACTTGTTGTGGCCACGTGTTGCT
241TTTGTGAGTAGATTGCCTCTATCGCCGTCCACACGCTCCGACGAGTAATCAGTGTATTAC
301AGTTCACATAAGGAACGCCCTAGTGGCTCAGATAGACACATGGTAGTTTGCGGTCCGAGA
361GATCGACCCGCTCACTCCAGTTTGGCCAATAAATGTGGCCGGGCGCACTTTAGAGTAGAA
421ACTCCCTGTTTAAGTCCCCTTGTTATAAATGGTATGGGCGATAAGCCTCTACAGACACCG
481TGGACGGTTGACGTTGATAAGCTTCTATATGCTAGAGCTGCTGCGGCGAAAATTCCTGCC
541CGTACCTTGAGCATCCAGGCCACAGGATGTTACGGGGGAAGATCGTGAGCATAACCTACA
601TCGTGCAAGTTCATCCACGTAGAGAAGTCACCCAGACCACGTCTGAGCTTCAAATATGTT
661GCATTCCACAATGTGGTATTGAGGCGCTCGGTCAAACCGGACGAGTTACAGTCTGCAGCA
721AATTCCGACACGTAGCACTTCCTTTGAACTTCTATTGACAACCTCTATGCTATGTGATTG
781TCCAAGCGTATCCACTGATAGCAAAGGTAAGCCTTACTCTGAAGAACATAATCTGGGACT
841AGGGACACCTCTGTCCGTAAACACACCGGAGCGCCTGCCCGGAGGATATACTATTATCAC
901TAGTGGTCCACGAGCTCCTATGGACCCCGTATCTCGGGAGACGATCTTCCTCGAATTTGG
961ACATTGCACTCTCTAAGCGATAGCGGATCCAAGTGAAGAGACCATCGATAAAATGACTGC
1021CAATACACATCGACGCTAAGGTCGACCGTACGGCTCGGATGCTTGTACTCTAAGAGGGCT
1081AAACAACGCTGAACTTTGTATATAGTCCTAGCCTTCTGAGTCGAGAATGGCGCGGCGCGT
1141TCAAATGGTACGTACAGACTAGCTGACGCCACCCCACAGGTCTCATTTATCGGAGTGGGA
1201GCGAAGTCGCAATAATACAGCGAGATTTTATGCCACGCTTCTCCGAGAATTCCTACAACT
1261CAATGACATACTTGGGACTAGAGACCGATGGTCGGCAACAGTGGAGTCTATCGCTCTGGC
1321ACAGTCGCCGTGAAGGGCTGATCGACACTGGCGGCGAACTGCCGACCACACTATATACAT
1381GAACTGCGACCTGTGTCCTAAGAGAACGGGACGCTGCATTGCCAGTCAATACGGATCCGG
1441ATTCATGCGC

Biobank

Physical sample preservation

Registered material from this specimen and how it is preserved. Exact freezer positions and rack locations are restricted to authorized staff.

Preserved samples

1

−80 °C / LN₂

1

Holding laboratories

1

Available

1

Available

Cryopreserved culture

TIS-M-0115

Preservation
Liquid nitrogen
Quantity
2 tubes
Preserved
2020-09-01

National Heritage Collection — Store (Demo)

Sample lifecycle

01 Field sampling02 Registration03 Preservation04 Molecular work

2020-07-13 · Field sampling — Bandar Khayran, Muscat — water sample at 5 m.

2020-07-18 · Registration — Registered at Marine Science Centre (Demo) as OMN-MAR-0115.

2020-07-18 · Preservation — Material preserved: Liquid nitrogen.

2020-09-01 · Molecular work — DNA extraction and barcoding (demo).

Sample identifiers, quantities and laboratories are synthetic demonstration values; no storage monitoring history is claimed.

Research

Research & provenance

How this record came to be, and literature linked to it.

Data provenance

  1. Sampling event

    Bandar Khayran, 2020-07-13 · 5 m · by R. Al-Kindi

  2. Curated record

    Marine Science Centre (Demo)

  3. Preserved material

    1 sample across 1 laboratories (demo)

  4. Research data

    DNA barcoding (demo)

No publications linked

Publications citing this specimen will appear here once they are added by the holding institution.

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